Fang Ge, Chen Li, Shahid Iqbal, Arif Muhammad, Fuyi Li, Maha A.Thafar, Zihao Yan, Apilak Worachartcheewan, Xiaofeng Xu, Jiangning Song*, and Dong-Jun Yu*. VPatho: a deep learning-based two-step approach for accurate prediction of gain-of-function and loss-of-function variants. Submitted.